Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00181 | Not Available | Negative | 2990814 - 2991149 | 11907.3 |
| type ii secretion system protein e | ALO56_00182 | Q6FA79 | Negative | 2991277 - 2993061 | 66065.7 |
| adenylate cye | ALO56_00183 | Not Available | Negative | 2994346 - 2995713 | 51852.7 |
| acetylornithine deacetylase | ALO56_00184 | Q9K4Z2 | Positive | 2995768 - 2997024 | 45204.8 |
| amino-acid acetyltransferase | ALO56_00185 | P61919 | Positive | 2997146 - 2998444 | 47878.5 |
| organic hydroperoxide resistance protein | ALO56_03700 | P0A0V4 | Positive | 2998811 - 2999230 | 14230.8 |
| lipase | ALO56_03701 | Q5UQ83 | Positive | 2999256 - 3000275 | 36434.5 |
| elongation factor p | ALO56_05110 | Q885R6 | Negative | 3000354 - 3000989 | 23593.2 |
| uncharacterized protein | ALO56_05111 | Q88LS1 | Negative | 3001023 - 3002192 | 44304.6 |
| uncharacterized protein | ALO56_03704 | Not Available | Positive | 3002320 - 3002706 | 14479.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









