Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_01311 | Q881F7 | Positive | 2967479 - 2968237 | 27590.0 |
| uncharacterized protein | ALO56_04611 | Not Available | Positive | 2968262 - 2969224 | 35770.9 |
| allophanate hydrolase 2 subunit 2 | ALO56_100532 | Q7WY77 | Positive | 2969221 - 2970195 | 34198.0 |
| tetr family transcriptional regulator | ALO56_01313 | Not Available | Negative | 2970261 - 2970833 | 20191.9 |
| short-chain dehydrogenase/reductase sdr | ALO56_01314 | P37694 | Positive | 2970999 - 2971787 | 27980.6 |
| uncharacterized protein | ALO56_01315 | Not Available | Positive | 2971850 - 2972233 | 13576.1 |
| molecular chaperone groes | ALO56_01316 | Q7T3C7 | Positive | 2972273 - 2973274 | 36163.5 |
| mandelate racemase | ALO56_04612 | Q9RDE9 | Negative | 2973315 - 2974694 | 50502.4 |
| hypothetical protein | ALO56_101335 | Not Available | Negative | 2974609 - 2976174 | 56483.0 |
| hypothetical protein | ALO56_100542 | P70785 | Positive | 2976308 - 2976994 | 25148.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









