Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase gcn5 | ALO56_03576 | Not Available | Positive | 2942386 - 2943519 | 42426.0 |
| polysaccharide deacetylase | ALO56_100147 | Not Available | Positive | 2943556 - 2944509 | 35312.6 |
| amidohydrolase | ALO56_03577 | P40896 | Negative | 2944759 - 2946018 | 44520.9 |
| major facilitator transporter | ALO56_03578 | P16482 | Negative | 2946015 - 2947325 | 46752.7 |
| lysr family transcriptional regulator | ALO56_03579 | Q8X4M5 | Negative | 2947514 - 2948416 | 33434.4 |
| regulatory protein, lysr:lysr, substrate-binding | ALO56_03580 | Not Available | Negative | 2948429 - 2949334 | 33065.0 |
| fad-binding oxidoreductase | ALO56_03581 | P77748 | Positive | 2949489 - 2952536 | 112021.0 |
| helix-turn-helix, fis-type | ALO56_01301 | Q43965 | Negative | 2952654 - 2954471 | 66596.0 |
| benzaldehyde dehydrogenase | ALO56_01302 | K9UV87 | Positive | 2954690 - 2956171 | 51524.9 |
| 3-alpha-hydroxysteroid dehydrogenase | ALO56_01303 | P0DMP5 | Positive | 2956230 - 2956997 | 27470.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









