Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | ALO56_00917 | P55574 | Positive | 2929531 - 2930379 | 30892.4 |
| transketolase, c-terminal subunit | ALO56_00918 | P55573 | Positive | 2930376 - 2931395 | 36115.9 |
| oxidoreductase, aldo/keto reductase family protein | ALO56_03568 | A2XRZ0 | Negative | 2931807 - 2932802 | 36284.1 |
| lexa repressor | ALO56_03569 | Q881U0 | Positive | 2933003 - 2933620 | 22502.2 |
| uncharacterized protein | ALO56_03570 | Not Available | Positive | 2933617 - 2934240 | 21925.7 |
| uncharacterized protein | ALO56_03571 | Not Available | Positive | 2934248 - 2935663 | 52981.1 |
| error-prone dna polymerase | ALO56_03572 | Q48IB1 | Positive | 2935666 - 2938755 | 116466.0 |
| uncharacterized protein | ALO56_03573 | Q10082 | Positive | 2938827 - 2939678 | 31958.9 |
| mg2+ transporter protein | ALO56_03574 | Not Available | Negative | 2939777 - 2940706 | 34986.7 |
| glutathione synthase/ribosomal protein s6 modification glutaminyl transferase | ALO56_03575 | Q8D5R2 | Negative | 2940713 - 2942299 | 59889.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









