Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00907 | Not Available | Positive | 2921620 - 2922030 | 15288.0 |
| exchangeable effector locus protein | ALO56_00908 | Not Available | Negative | 2922164 - 2922583 | 14697.1 |
| uncharacterized protein | ALO56_00909 | Not Available | Positive | 2923105 - 2923410 | 11240.3 |
| lipoprotein | ALO56_00910 | Not Available | Positive | 2923533 - 2923928 | 14025.9 |
| uncharacterized protein | ALO56_00911 | Not Available | Positive | 2924341 - 2924868 | 20448.7 |
| putative conserved effector locus protein | ALO56_00912 | Not Available | Positive | 2924983 - 2925930 | 35623.6 |
| uncharacterized protein | ALO56_00913 | Not Available | Positive | 2926027 - 2926236 | 7766.2 |
| lysr family transcriptional regulator | ALO56_00914 | Q57083 | Negative | 2926245 - 2927162 | 34033.9 |
| putative short-chain type regulator | ALO56_04535 | P55575 | Positive | 2927090 - 2928100 | 35585.8 |
| mfs transporter | ALO56_00916 | Q88FY6 | Positive | 2928211 - 2929512 | 47553.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









