Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inositol monophosphatase | ALO56_00900 | Q9HXI4 | Positive | 2912099 - 2912920 | 29777.6 |
| putative exported protein | ALO56_100022 | P0AB36 | Negative | 2912984 - 2913523 | 18637.4 |
| protein-export membrane protein secf | ALO56_00901 | Q9HXI2 | Negative | 2913634 - 2914545 | 33073.7 |
| protein translocase subunit secd | ALO56_04533 | Q9HXI1 | Negative | 2914555 - 2916426 | 67522.7 |
| preprotein translocase, subunit yajc | ALO56_00903 | P0ADZ9 | Negative | 2916486 - 2916833 | 12380.2 |
| queuine trna-ribosyltransferase | ALO56_00904 | Q887B0 | Negative | 2916877 - 2918010 | 41772.8 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | ALO56_00905 | Q9L6W9 | Negative | 2918007 - 2919071 | 38731.2 |
| Trna-leu | Not Available | Not Available | Positive | 2919189 - 2919273 | Not Available |
| cytosine-specific methyltransferase | ALO56_00906 | P31033 | Positive | 2919589 - 2920545 | 34886.1 |
| type ii dna restriction endonuclease r.ngoi | ALO56_101238 | P31032 | Positive | 2920545 - 2921408 | 31412.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









