Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | ALO56_02379 | Q9I0I6 | Positive | 225972 - 227651 | 59817.3 |
| uncharacterized protein | ALO56_02380 | Not Available | Positive | 227747 - 228811 | 38935.3 |
| nadh-quinone oxidoreductase subunit n | ALO56_02381 | Q9I0I9 | Negative | 228869 - 230338 | 51961.4 |
| nadh:ubiquinone oxidoreductase subunit m | ALO56_02382 | Q9I0J0 | Negative | 230346 - 231878 | 55674.7 |
| nadh-ubiquinone oxidoreductase chain l | ALO56_100061 | Q9I0J1 | Negative | 231918 - 233771 | 66574.5 |
| nadh-quinone oxidoreductase subunit k | ALO56_02383 | Q48H45 | Negative | 233768 - 234076 | 11005.0 |
| nadh:ubiquinone oxidoreductase subunit j | ALO56_02384 | Q9I0J3 | Negative | 234073 - 234582 | 17997.6 |
| nadh-quinone oxidoreductase subunit i | ALO56_02385 | Q48H47 | Negative | 234593 - 235141 | 20532.7 |
| nadh-quinone oxidoreductase subunit h | ALO56_02386 | Q87ZQ3 | Negative | 235153 - 236160 | 37459.5 |
| nadh-quinone oxidoreductase | ALO56_04863 | Q87ZQ4 | Negative | 236157 - 238874 | 98437.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









