Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine aminotransferase | ALO56_00880 | P77806 | Negative | 2893965 - 2895113 | 42710.1 |
| gtpase der | ALO56_04529 | Q886Y6 | Negative | 2895234 - 2896715 | 55357.5 |
| outer membrane protein assembly factor bamb | ALO56_00882 | Q9HXJ7 | Negative | 2896844 - 2897995 | 40847.8 |
| uncharacterized protein | ALO56_00883 | Not Available | Negative | 2897988 - 2898629 | 22830.9 |
| histidine--trna ligase | ALO56_00884 | Q886Y9 | Negative | 2898669 - 2899958 | 47962.7 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | ALO56_00885 | Q48LZ4 | Negative | 2899981 - 2901090 | 39749.2 |
| cro/ci family transcriptional regulator | ALO56_00886 | A8GHW6 | Negative | 2901094 - 2902095 | 35296.8 |
| type iv pilus bioproteinsis/stability protein pilw | ALO56_00887 | Q9HXJ2 | Negative | 2902095 - 2902853 | 28645.9 |
| dual-specificity rna methyltransferase rlmn | ALO56_00888 | Q4ZX26 | Negative | 2902892 - 2904055 | 42891.9 |
| nucleoside diphosphate kinase | ALO56_00889 | Q48LZ8 | Negative | 2904072 - 2904497 | 14951.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









