Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmp synthase | ALO56_00870 | Q48LY0 | Negative | 2882249 - 2883826 | 58154.8 |
| inosine-5'-monophosphate dehydrogenase | ALO56_00871 | P31002 | Negative | 2883932 - 2885401 | 51936.9 |
| uncharacterized protein | ALO56_00872 | Not Available | Negative | 2885497 - 2886045 | 20550.6 |
| uncharacterized protein | ALO56_00873 | Not Available | Negative | 2886122 - 2886901 | 27617.1 |
| exodeoxyribonuclease 7 large subunit | ALO56_00874 | Q4ZX12 | Positive | 2887058 - 2888473 | 52618.0 |
| peptidase, m23/m37 family protein | ALO56_00875 | P0AFT0 | Positive | 2888481 - 2889305 | 29451.7 |
| 2-isopropylmalate synthase | ALO56_00876 | Q4ZX14 | Positive | 2889698 - 2891368 | 61491.6 |
| oxaloacetate decarboxylase | ALO56_00877 | Q48LY6 | Positive | 2891735 - 2892604 | 31443.5 |
| uncharacterized protein | ALO56_00878 | Not Available | Negative | 2892697 - 2893185 | 16944.0 |
| carbon-nitrogen family hydrolase | ALO56_00879 | P0DP67 | Negative | 2893186 - 2893977 | 29679.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









