Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00852 | Not Available | Negative | 2854319 - 2854786 | 16997.2 |
| uncharacterized protein | ALO56_00853 | Not Available | Negative | 2855040 - 2855258 | 7953.52 |
| hexapeptide repeat-containing transferase | ALO56_00854 | P40882 | Negative | 2855258 - 2855782 | 18637.4 |
| mutt/nudix family protein | ALO56_00855 | Q3Z2F4 | Negative | 2855841 - 2856521 | 25405.3 |
| mutt/nudix family protein | ALO56_00856 | P93740 | Positive | 2856587 - 2857138 | 20881.1 |
| uncharacterized protein | ALO56_00857 | Not Available | Positive | 2857189 - 2857752 | 21430.9 |
| uncharacterized protein | ALO56_00858 | Not Available | Negative | 2858047 - 2858430 | 13908.5 |
| phosphoribosylformylglycinamidine synthase | ALO56_04527 | Q48LX3 | Negative | 2858375 - 2862271 | 140850.0 |
| membrane-bound lytic murein transglycosylase f | ALO56_00859 | Q4ZX03 | Positive | 2862551 - 2863975 | 53282.8 |
| multicopper oxidase | ALO56_00860 | I6WZK7 | Negative | 2864475 - 2865848 | 50614.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









