Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaredoxin | ALO56_00843 | P0AEG7 | Negative | 2843628 - 2844368 | 26386.0 |
| tyrosine recombinase xerd | ALO56_00844 | Q88MV0 | Negative | 2844515 - 2845411 | 33794.8 |
| 50s ribosomal protein l19 | ALO56_00845 | Q48LV7 | Negative | 2845513 - 2845863 | 12955.9 |
| ribosome maturation factor rimm | ALO56_00846 | Q48LV9 | Negative | 2846666 - 2847205 | 20066.0 |
| 30s ribosomal protein s16 | ALO56_100026 | Q886V2 | Negative | 2847211 - 2847468 | 9564.42 |
| signal recognition particle protein | ALO56_00847 | P0AGD9 | Negative | 2847716 - 2849092 | 49376.8 |
| cytochrome c assembly family protein | ALO56_00848 | Not Available | Positive | 2849306 - 2850118 | 29706.4 |
| uncharacterized protein | ALO56_00849 | P37908 | Positive | 2850125 - 2851375 | 46553.6 |
| citrate-proton symport | ALO56_00850 | P37643 | Positive | 2851651 - 2852991 | 47512.8 |
| phosphoribosylglycinamide formyltransferase 2 | ALO56_00851 | Q4ZWZ4 | Negative | 2853034 - 2854215 | 42185.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









