Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00834 | Not Available | Positive | 2827345 - 2829441 | 76899.2 |
| xenobiotic reductase | ALO56_00835 | Not Available | Negative | 2829588 - 2830694 | 40480.1 |
| single-stranded-dna-specific exonuclease recj | ALO56_04517 | P28355 | Negative | 2830806 - 2832530 | 63089.4 |
| yaeq | ALO56_04518 | P0A1S7 | Negative | 2832573 - 2833208 | 24090.8 |
| uncharacterized protein | ALO56_00838 | Not Available | Positive | 2833334 - 2834212 | 32493.7 |
| uncharacterized protein | ALO56_00839 | Not Available | Negative | 2834321 - 2834629 | 10944.4 |
| response regulator/eal domain-containing protein | ALO56_00840 | Not Available | Negative | 2835583 - 2836872 | 46474.4 |
| sensory box histidine kinase/response regulator | ALO56_04520 | Not Available | Negative | 2836967 - 2840671 | 136319.0 |
| threonine synthase | ALO56_04521 | P29363 | Negative | 2840729 - 2842189 | 54020.7 |
| homoserine dehydrogenase | ALO56_00842 | P29365 | Negative | 2842189 - 2843493 | 46254.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









