Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO56_200050 | A9WGE3 | Positive | 2806787 - 2807977 | 43151.8 |
| hypothetical protein | ALO56_200233 | Not Available | Negative | 2808044 - 2808580 | 19055.6 |
| mbth-like protein | ALO56_01378 | P59965 | Negative | 2809050 - 2809277 | 8779.39 |
| diaminobutyrate--2-oxoglutarate aminotransferase | ALO56_01379 | Q9Z3R2 | Negative | 2809359 - 2810771 | 50626.6 |
| peptide synthase | ALO56_04632 | Not Available | Negative | 2810954 - 2819652 | 322526.0 |
| chemotaxis protein chew | ALO56_00830 | Not Available | Negative | 2821655 - 2822344 | 25176.9 |
| protein-glutamate o-methyltransferase | ALO56_100897 | Q88MS8 | Negative | 2822344 - 2823636 | 46725.8 |
| chemotaxis protein chew | ALO56_00831 | Not Available | Negative | 2823615 - 2824151 | 20103.3 |
| histidine kinase, hamp region: chemotaxis sensory transducer | ALO56_00832 | Q88N45 | Negative | 2824161 - 2825783 | 58918.7 |
| uncharacterized protein | ALO56_00833 | Not Available | Negative | 2826306 - 2827049 | 25942.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









