Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_01023 | Not Available | Positive | 2774459 - 2774773 | 11361.5 |
| uncharacterized protein | ALO56_01024 | Not Available | Positive | 2774778 - 2775170 | 14122.4 |
| eal domain-containing protein | ALO56_01025 | Q9KVL2 | Positive | 2775638 - 2776801 | 43984.6 |
| deoxyguanosinetriphosphate triphosphohydrolase-like protein | ALO56_01026 | B7UXM6 | Positive | 2776865 - 2778196 | 49832.5 |
| response regulator receiver | ALO56_01027 | Not Available | Positive | 2778457 - 2778855 | 14600.2 |
| luxr response regulator receiver | ALO56_01028 | P0A4H3 | Positive | 2779184 - 2779810 | 23319.8 |
| pas-like protein | ALO56_01029 | P26762 | Positive | 2779819 - 2783457 | 134571.0 |
| uncharacterized protein | ALO56_01030 | P38521 | Negative | 2783561 - 2784049 | 18241.6 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | ALO56_01031 | P39045 | Positive | 2784264 - 2785733 | 53002.0 |
| hypothetical protein | ALO56_200006 | O34524 | Negative | 2785794 - 2786768 | 34812.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









