Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldolase | ALO56_00923 | Q0KBC9 | Negative | 215916 - 216554 | 23311.1 |
| hopan1 protein | ALO56_00924 | Q48PB0 | Negative | 216554 - 217843 | 44526.4 |
| oxidoreductase | ALO56_00925 | Q0KBC7 | Negative | 217854 - 218759 | 31063.5 |
| methylenetetrahydrofolate reductase | ALO56_01912 | O67422 | Positive | 219053 - 219898 | 31423.2 |
| atp-dependent rna helicase rhle | ALO56_04759 | Not Available | Positive | 220210 - 222114 | 68438.3 |
| 6-carboxy-5,6,7,8-tetrahydropterin synthase | ALO56_02374 | P65871 | Negative | 222684 - 223040 | 13658.3 |
| uncharacterized protein | ALO56_02375 | Not Available | Positive | 223257 - 223565 | 11597.9 |
| peptidase | ALO56_02377 | Not Available | Positive | 223565 - 223870 | 11566.9 |
| response regulator receiver:transcriptional regulatory protein, c-terminal | ALO56_02378 | Q9I0I1 | Positive | 223870 - 224538 | 24537.4 |
| sensor protein phoq | ALO56_100370 | Q9I0I2 | Positive | 224535 - 225857 | 49127.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









