Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative malate:quinone oxidoreductase | ALO56_04670 | Q88NF9 | Positive | 2763790 - 2765517 | 63181.5 |
| luxr family transcriptional regulator | ALO56_01514 | Not Available | Positive | 2766055 - 2768874 | 103987.0 |
| threonine dehydratase | ALO56_01705 | P53607 | Negative | 2768890 - 2769386 | 18277.7 |
| hypothetical protein | ALO56_200155 | Not Available | Negative | 2769417 - 2769929 | 18835.8 |
| hypothetical protein | ALO56_04558 | P00436 | Negative | 2769942 - 2770165 | 8134.81 |
| protocatechuate 3,4-dioxygenase subunit beta | ALO56_01018 | P00437 | Negative | 2770099 - 2770818 | 26696.9 |
| pca operon transcription factor pcaq | ALO56_01019 | P0A4T6 | Negative | 2770953 - 2771882 | 33827.2 |
| uncharacterized protein | ALO56_01020 | Not Available | Negative | 2771915 - 2772157 | 9244.11 |
| uncharacterized protein | ALO56_01021 | Not Available | Negative | 2772246 - 2772866 | 22357.8 |
| acyltransferase 3 | ALO56_01022 | Not Available | Negative | 2772947 - 2774032 | 40623.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









