Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf:atp-binding protein | ALO56_05217 | Not Available | Positive | 2749874 - 2751121 | 44856.7 |
| uncharacterized protein | ALO56_04234 | Not Available | Positive | 2751292 - 2751615 | 11565.5 |
| glucose dehydrogenase, pqq-dependent | ALO56_100137 | P75804 | Positive | 2751631 - 2752836 | 44291.6 |
| peptidase | ALO56_04235 | Not Available | Negative | 2752933 - 2753241 | 11009.9 |
| hypothetical protein | ALO56_200053 | Q51758 | Positive | 2756107 - 2756319 | 7974.53 |
| flavin reductase-like protein | ALO56_01508 | P76121 | Negative | 2756690 - 2757274 | 21579.6 |
| uncharacterized protein | ALO56_01509 | O32147 | Negative | 2758024 - 2758992 | 33966.3 |
| aldehyde oxidase and xanthine dehydrogenase | ALO56_04669 | Not Available | Negative | 2758995 - 2761211 | 80021.8 |
| oxidoreductase, molybdopterin-binding subunit | ALO56_01511 | Not Available | Negative | 2761221 - 2762204 | 34877.0 |
| twin-arginine translocation pathway signal | ALO56_01512 | Not Available | Negative | 2762204 - 2762893 | 23987.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









