Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mismatched base pair and cruciform dna recognition protein | ALO56_04224 | Q886I3 | Positive | 2742013 - 2742204 | 6458.65 |
| ribonuclease bn | ALO56_04225 | O34437 | Positive | 2742431 - 2743420 | 36323.0 |
| peptide deformylase | ALO56_04226 | Q886I1 | Positive | 2743448 - 2743987 | 20101.3 |
| n-acetyltransferase gcn5 | ALO56_04227 | Not Available | Negative | 2743997 - 2744407 | 15441.8 |
| histidine transporter, periplasmic histidine-binding protein | ALO56_100024 | Not Available | Positive | 2744557 - 2745576 | 36875.3 |
| n-acetyltransferase gcn5 | ALO56_04228 | Q9HX72 | Positive | 2745584 - 2746111 | 19487.4 |
| uncharacterized protein | ALO56_04229 | Not Available | Positive | 2746211 - 2746711 | 18217.5 |
| cytosine deaminase | ALO56_04230 | P78594 | Positive | 2746737 - 2747180 | 16425.7 |
| sigma factor sigb regulation protein rsbq | ALO56_04231 | Q10J20 | Positive | 2747667 - 2748515 | 30938.8 |
| sensory box histidine kinase | ALO56_04232 | Q06904 | Positive | 2748505 - 2749680 | 43337.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









