Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional purine biosynthesis protein purh | ALO56_01197 | Q87VR9 | Negative | 2709837 - 2711441 | 57546.8 |
| fis family transcriptional regulator | ALO56_01198 | Q9HUW0 | Negative | 2711523 - 2711843 | 11722.1 |
| pp_02270 | ALO56_01199 | Not Available | Negative | 2711840 - 2712853 | Not Available |
| ribosomal protein l11 methyltransferase | ALO56_04591 | Q87VS3 | Negative | 2714557 - 2715435 | 31889.7 |
| acetyl-coa carboxylase biotin carboxylase subunit | ALO56_04592 | P37798 | Negative | 2715561 - 2716925 | 49473.4 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | ALO56_01202 | P37799 | Negative | 2716922 - 2717383 | 16270.8 |
| 3-dehydroquinate dehydratase | ALO56_01203 | Q48DI3 | Negative | 2717460 - 2717912 | 16447.8 |
| thiol:disulfide interchange protein dsbd | ALO56_04593 | Q9HUW5 | Negative | 2718041 - 2719894 | 66274.6 |
| uncharacterized protein | ALO56_01205 | Not Available | Negative | 2719938 - 2720243 | 10881.3 |
| tpr domain-containing protein | ALO56_01206 | Not Available | Negative | 2720212 - 2720940 | 26303.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









