Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_02814 | Not Available | Negative | 2698019 - 2698726 | 25185.4 |
| hypothetical protein | ALO56_01190 | Q9HZU2 | Positive | 2698955 - 2699101 | 4775.83 |
| precorrin-2 c-methyltransferase | ALO56_01191 | Q9HZU3 | Positive | 2699098 - 2699832 | 26820.6 |
| cbig protein/precorrin-3b c17-methyltransferase | ALO56_01192 | P21640 | Positive | 2699832 - 2701535 | 60368.9 |
| uncharacterized protein | ALO56_01193 | Not Available | Positive | 2701880 - 2702710 | 29970.1 |
| uncharacterized protein | ALO56_01194 | Not Available | Positive | 2702764 - 2703498 | 26717.7 |
| uncharacterized protein | ALO56_01195 | Not Available | Positive | 2704151 - 2704786 | 23329.0 |
| membrane protein, marc family | ALO56_100003 | O66819 | Negative | 2704793 - 2705410 | 22129.8 |
| sensor histidine kinase/response regulator rets | ALO56_04589 | Not Available | Negative | 2705462 - 2708500 | 112104.0 |
| phosphoribosylamine--glycine ligase | ALO56_01196 | Q87VR8 | Negative | 2708340 - 2709635 | 45656.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









