Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_01238 | Not Available | Negative | 2675691 - 2676968 | 47848.4 |
| putative lipoprotein | ALO56_01239 | Not Available | Negative | 2677002 - 2677547 | 20067.8 |
| transcriptional regulator, tetr family | ALO56_100155 | Not Available | Negative | 2677573 - 2678316 | 27985.9 |
| lysine--trna ligase | ALO56_100005 | Q886S6 | Negative | 2678376 - 2679977 | 60465.1 |
| peptide chain release factor 2 | ALO56_01240 | Q3BUB7 | Negative | 2680002 - 2680916 | 34000.9 |
| response regulator wspr | ALO56_01241 | Q55434 | Negative | 2681428 - 2682432 | 37053.4 |
| chemotaxis response regulator protein-glutamate methylesterase 3 | ALO56_100610 | Q4ZWW3 | Negative | 2682478 - 2683185 | 24926.3 |
| response regulator receiver:chew-like protein:atp-binding region, atpase-like:hpt | ALO56_01242 | P18769 | Negative | 2683485 - 2684987 | 55864.0 |
| formyltetrahydrofolate deformylase | ALO56_02802 | Not Available | Positive | 2685484 - 2686350 | 32771.3 |
| bifunctional protein fold | ALO56_02803 | Q883B5 | Positive | 2686347 - 2687252 | 31687.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









