Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde oxidoreductase 2fe-2s subunit | ALO56_04198 | Not Available | Positive | 2657027 - 2657698 | 23563.2 |
| oxidoreductase, molybdopterin-binding subunit | ALO56_04199 | P77324 | Positive | 2657695 - 2658645 | 33419.3 |
| aldehyde oxidase and xanthine dehydrogenase family protein | ALO56_05205 | P77489 | Positive | 2658718 - 2660569 | 65964.4 |
| putative sensory box ggdef/eal domain-containing protein | ALO56_01816 | Q9I310 | Negative | 2660635 - 2661504 | 31907.2 |
| rnd efflux membrane fusion protein | ALO56_100412 | Not Available | Negative | 2661652 - 2662553 | 33002.8 |
| tetr family transcriptional regulator | ALO56_01223 | Not Available | Positive | 2662627 - 2663265 | 23261.9 |
| ribosomal rna small subunit methyltransferase j | ALO56_04596 | Q886R2 | Negative | 2663283 - 2664077 | 28533.5 |
| uncharacterized protein | ALO56_01225 | Not Available | Positive | 2664174 - 2664794 | 22735.9 |
| uncharacterized protein | ALO56_01226 | Not Available | Negative | 2664795 - 2665484 | 25493.6 |
| putative carboxyvinyl-carboxyphosphonate phosphorylmutase | ALO56_01227 | Not Available | Negative | 2665487 - 2666431 | 33376.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









