Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_04188 | Not Available | Positive | 2647878 - 2648591 | 26772.2 |
| nudix family hydrolase | ALO56_04189 | Not Available | Positive | 2648618 - 2649163 | 19390.4 |
| deoxyribodipyrimidine photolyase-like protein | ALO56_04190 | A9CH39 | Positive | 2649201 - 2650739 | 58489.6 |
| aldo/keto reductase | ALO56_04191 | Q9STX2 | Positive | 2650964 - 2652025 | 38993.2 |
| uncharacterized protein | ALO56_04192 | Not Available | Positive | 2652093 - 2652464 | 13163.7 |
| zn-ribbon-like protein | ALO56_04193 | Not Available | Negative | 2652472 - 2653050 | 21629.8 |
| uncharacterized protein | ALO56_04194 | Not Available | Positive | 2653628 - 2654056 | 15443.2 |
| l-sorbosone dehydrogenase | ALO56_04195 | Q44091 | Positive | 2654053 - 2655345 | 46151.6 |
| short-chain dehydrogenase/reductase family oxidoreductase | ALO56_04196 | P39577 | Negative | 2655430 - 2656182 | 26623.0 |
| tetr family transcriptional regulator | ALO56_04197 | Not Available | Positive | 2656277 - 2656879 | 21969.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









