Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase subunit l | ALO56_100229 | P96890 | Negative | 2586177 - 2587913 | 61870.3 |
| allophanate hydrolase/urea amidolyase-like protein | ALO56_05186 | Not Available | Negative | 2587910 - 2589514 | 56481.9 |
| hypothetical protein | ALO56_04162 | Q4ZZ54 | Negative | 2589521 - 2590315 | 28776.5 |
| hypothetical protein | ALO56_04163 | Q87UC7 | Negative | 2590312 - 2591082 | 26832.0 |
| na+/proline, na+/panthothenate symporter | ALO56_100230 | P42964 | Negative | 2591101 - 2592384 | 44643.9 |
| gntr family transcriptional regulator | ALO56_04164 | Not Available | Positive | 2592587 - 2593255 | 24759.9 |
| chromate transporter | ALO56_04165 | Q58128 | Positive | 2593302 - 2594660 | 48813.4 |
| glutathione s-transferase | ALO56_100843 | Q12390 | Positive | 2595380 - 2596081 | 26144.6 |
| uncharacterized protein | ALO56_04166 | Not Available | Negative | 2596231 - 2597037 | 30270.7 |
| lipase | ALO56_04167 | P9WK86 | Negative | 2597386 - 2598405 | 35936.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









