Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_04152 | Not Available | Positive | 2577216 - 2577920 | 26661.3 |
| lysr family transcriptional regulator | ALO56_04153 | P0A9F8 | Negative | 2577938 - 2578825 | 32458.3 |
| uncharacterized protein | ALO56_04154 | Not Available | Positive | 2578961 - 2579803 | 29168.4 |
| uncharacterized protein | ALO56_04155 | Not Available | Positive | 2580624 - 2580812 | 6992.29 |
| uncharacterized protein | ALO56_04156 | Not Available | Positive | 2580816 - 2581550 | 26561.4 |
| uncharacterized protein | ALO56_04157 | Not Available | Positive | 2581547 - 2582062 | 19112.9 |
| uncharacterized protein | ALO56_04158 | P54471 | Negative | 2582178 - 2582894 | 26633.5 |
| alcohol dehydrogenase zinc-binding domain-containing protein | ALO56_04159 | Q08257 | Negative | 2583091 - 2584002 | 31549.0 |
| putative monooxygenase | ALO56_04160 | Not Available | Negative | 2584078 - 2584446 | 13411.0 |
| protein opdo | ALO56_100413 | Q88JX6 | Negative | 2584783 - 2586024 | 45360.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









