Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | ALO56_02250 | Not Available | Positive | 2552544 - 2554244 | 60688.4 |
| diguanylate cye | ALO56_02251 | Not Available | Positive | 2554419 - 2555615 | 44369.6 |
| acetyltransferase | ALO56_02252 | Not Available | Positive | 2555710 - 2556144 | 16593.8 |
| methyl-accepting chemotaxis protein | ALO56_04842 | Not Available | Negative | 2556188 - 2557882 | 59596.5 |
| uncharacterized protein | ALO56_02254 | Not Available | Positive | 2558109 - 2560118 | 75760.0 |
| phosphatidylcholine synthase | ALO56_02255 | Q9HXE9 | Positive | 2560207 - 2560926 | 26729.5 |
| putative sugar efflux transporter | ALO56_02256 | Q4ZY49 | Negative | 2560977 - 2562188 | 42058.9 |
| uncharacterized protein | ALO56_02257 | P40761 | Negative | 2562639 - 2563124 | 18463.7 |
| alkylphosphonate utilization operon protein phna | ALO56_04846 | P0AFJ3 | Negative | 2563168 - 2563587 | 15238.3 |
| metal-dependent phosphohydrolase | ALO56_02258 | P46144 | Positive | 2563667 - 2564326 | 24587.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









