Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_02240 | Not Available | Positive | 2538051 - 2538332 | 9692.63 |
| uncharacterized protein | ALO56_02241 | Not Available | Positive | 2538607 - 2541507 | 104524.0 |
| uncharacterized protein | ALO56_02242 | Not Available | Positive | 2541601 - 2542491 | 33777.2 |
| uncharacterized protein | ALO56_02243 | Not Available | Positive | 2542508 - 2542696 | 6947.56 |
| h-ns-like protein | ALO56_02244 | Not Available | Positive | 2542761 - 2543126 | 13998.0 |
| uncharacterized protein | ALO56_02245 | Not Available | Negative | 2543432 - 2544829 | 51449.4 |
| uncharacterized protein | ALO56_02246 | Not Available | Negative | 2544822 - 2546552 | 62911.9 |
| putative signal transduction histidine kinase | ALO56_02247 | Not Available | Negative | 2547137 - 2548555 | 55058.2 |
| uncharacterized protein | ALO56_02248 | Not Available | Positive | 2548974 - 2549135 | 5903.28 |
| uncharacterized protein | ALO56_02249 | Not Available | Positive | 2550257 - 2551966 | 64835.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









