Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | ALO56_02233 | P37760 | Positive | 2526238 - 2527143 | 32871.2 |
| lipopolysaccharide biosynthesis protein | ALO56_02234 | Not Available | Positive | 2528067 - 2528984 | 34377.0 |
| glycosyl transferase family protein | ALO56_02235 | P37783 | Negative | 2529031 - 2529930 | 33956.4 |
| methyl-accepting chemotaxis protein | ALO56_04840 | Not Available | Negative | 2530214 - 2532277 | 73960.0 |
| dnaj domain-containing protein | ALO56_02237 | Not Available | Positive | 2532614 - 2533744 | 44438.5 |
| Trna-met | Not Available | Not Available | Positive | 2533863 - 2533939 | Not Available |
| putative phage integrase | ALO56_100683 | P37326 | Positive | 2533955 - 2535346 | 52085.8 |
| uncharacterized protein | ALO56_02238 | Not Available | Positive | 2535597 - 2536463 | 32720.0 |
| prophage cp4-57 regulatory, alpa-like protein | ALO56_100387 | Not Available | Positive | 2536554 - 2536835 | 10232.4 |
| uncharacterized protein | ALO56_04841 | Not Available | Positive | 2536709 - 2537440 | 27830.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









