Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | ALO56_01327 | Not Available | Positive | 190896 - 192029 | 41471.6 |
| glutathione s-transferase | ALO56_01328 | P0ACA2 | Positive | 192319 - 192948 | 23455.0 |
| uncharacterized protein | ALO56_01329 | P08369 | Negative | 193065 - 194441 | 50894.8 |
| sensory histidine kinase crec | ALO56_01330 | P08401 | Negative | 194773 - 196203 | 52895.7 |
| dna-binding response regulator creb | ALO56_01331 | P08368 | Negative | 196203 - 196883 | 25211.2 |
| uncharacterized protein | ALO56_01332 | Not Available | Negative | 196943 - 197446 | 18756.5 |
| acyltransferase | ALO56_01333 | P32129 | Positive | 197639 - 198532 | 33834.8 |
| uncharacterized protein | ALO56_01334 | Not Available | Negative | 199671 - 200237 | 18494.1 |
| uncharacterized protein | ALO56_01335 | Not Available | Positive | 200447 - 201505 | 40160.7 |
| zinc-containing alcohol dehydrogenase superfamily protein | ALO56_100265 | P46154 | Negative | 201655 - 202854 | 41908.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









