Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna reductase | ALO56_02224 | Q48MV5 | Negative | 2516474 - 2517751 | 46196.5 |
| uncharacterized protein | ALO56_02225 | P42810 | Positive | 2517996 - 2519705 | 63679.3 |
| outer-membrane lipoprotein lolb | ALO56_02226 | Q48MV7 | Positive | 2519710 - 2520327 | 22999.4 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | ALO56_02227 | Q4ZXX1 | Positive | 2520330 - 2521178 | 30483.9 |
| Trna-gln | Not Available | Not Available | Positive | 2521216 - 2521290 | Not Available |
| ribose-phosphate pyrophosphokinase | ALO56_02228 | Q888C6 | Positive | 2521336 - 2522277 | 34150.3 |
| 50s ribosomal protein l25 | ALO56_02229 | Q4ZXX3 | Positive | 2522392 - 2523030 | 23119.8 |
| peptidyl-trna hydrolase | ALO56_04839 | Q48MW1 | Positive | 2523123 - 2523779 | 23726.6 |
| ribosome-binding atpase ychf | ALO56_02231 | Q7VMI2 | Positive | 2523801 - 2524901 | 40012.1 |
| dtdp-glucose 4,6-dehydratase | ALO56_02232 | P37777 | Positive | 2525137 - 2526237 | 41298.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









