Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short chain dehydrogenase/reductase oxidoreductase | ALO56_02215 | Q8CN40 | Positive | 2507369 - 2508169 | 29003.4 |
| amine oxidase, flavin-containing | ALO56_100264 | Not Available | Positive | 2508166 - 2509413 | 46557.1 |
| cyclopropane-fatty-acyl-phospholipid synthase | ALO56_02216 | O53732 | Positive | 2510197 - 2511465 | 47381.1 |
| uncharacterized protein | ALO56_02217 | Not Available | Positive | 2511458 - 2511970 | 18303.9 |
| putative fe-s-cluster oxidoreductase | ALO56_02218 | Not Available | Positive | 2511922 - 2512281 | 13200.9 |
| lipid a deacylase | ALO56_02219 | Q9HVD1 | Negative | 2512354 - 2512872 | 19145.4 |
| glutamate racemase | ALO56_04838 | Q888B8 | Negative | 2512989 - 2513852 | 31098.7 |
| molybdopterin biosynthesis protein moeb | ALO56_02221 | Q56067 | Negative | 2513797 - 2514576 | 27430.2 |
| release factor glutamine methyltransferase | ALO56_02222 | Q9HVC8 | Negative | 2514561 - 2515394 | 30585.6 |
| peptide chain release factor 1 | ALO56_02223 | Q48MV4 | Negative | 2515395 - 2516477 | 40083.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









