Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_04829 | Not Available | Negative | 2477838 - 2479892 | 74187.2 |
| long-chain-fatty-acid--coa ligase | ALO56_04831 | Q5SKN9 | Negative | 2480138 - 2481925 | 66362.3 |
| unknown protein sequence | ALO56_02190 | Not Available | Negative | 2481867 - 2481992 | 4627.56 |
| lyse family transporter | ALO56_02191 | P0AG39 | Negative | 2482004 - 2482633 | 22217.4 |
| glycerate dehydrogenase | ALO56_02192 | Q59516 | Positive | 2482721 - 2483689 | 34049.2 |
| ribosomal rna small subunit methyltransferase c | ALO56_02193 | Q48MR4 | Positive | 2483874 - 2484872 | 36033.2 |
| uncharacterized protein | ALO56_02194 | A0A0H3AJF5 | Positive | 2485119 - 2485703 | 20718.8 |
| peptidase m48, ste24p | ALO56_02195 | P25894 | Negative | 2485764 - 2486582 | 29056.6 |
| uncharacterized protein | ALO56_02196 | O34906 | Negative | 2486737 - 2487366 | 23251.9 |
| uncharacterized protein | ALO56_02197 | Not Available | Negative | 2487398 - 2487661 | 9398.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









