Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein cysz -like protein | ALO56_00794 | Q887V6 | Negative | 2466620 - 2467381 | 28356.8 |
| alkyl hydroperoxide reductase | ALO56_00795 | P56876 | Positive | 2467669 - 2468268 | 21736.9 |
| thioredoxin reductase | ALO56_00796 | Q93HX6 | Positive | 2468401 - 2469363 | 33846.1 |
| peroxyureidoacrylate/ureidoacrylate amidohydrolase rutb | ALO56_02182 | Q4ZXR8 | Positive | 2469522 - 2470207 | 24600.2 |
| putative aminoacrylate peracid reductase rutc | ALO56_02183 | Q48MQ6 | Positive | 2470218 - 2470601 | 13703.6 |
| putative aminoacrylate hydrolase rutd | ALO56_02184 | Q4ZXS0 | Positive | 2470643 - 2471422 | 28660.1 |
| fmn reductase rutf | ALO56_02185 | Q4ZXS1 | Positive | 2471435 - 2471968 | 18774.2 |
| unknown protein sequence | ALO56_05255 | Not Available | Negative | 2472182 - 2473450 | 46857.8 |
| regulatory protein luxr | ALO56_04828 | A8GKU0 | Negative | 2473489 - 2476260 | 103303.0 |
| uncharacterized protein | ALO56_02187 | Q9HX91 | Negative | 2476443 - 2477807 | 50739.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









