Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | ALO56_04423 | P22862 | Negative | 2443779 - 2444816 | 38008.0 |
| doxx family protein | ALO56_00396 | Not Available | Positive | 2444801 - 2445235 | 15583.9 |
| mechanosensitive ion channel protein mscs | ALO56_00397 | P75783 | Positive | 2445360 - 2447627 | 81256.6 |
| dtdp-4-dehydrorhamnose reductase | ALO56_00398 | Q2SYI1 | Positive | 2447744 - 2448628 | 32636.9 |
| nad-dependent epimerase/dehydratase | ALO56_00399 | Q57664 | Positive | 2448621 - 2449550 | 33010.3 |
| pyrimidine monooxygenase ruta | ALO56_04504 | Q48MQ4 | Negative | 2449719 - 2450906 | 43566.0 |
| tetr family transcriptional regulator | ALO56_00783 | Not Available | Positive | 2451005 - 2451829 | 30840.5 |
| basic membrane lipoprotein | ALO56_00784 | Not Available | Positive | 2452212 - 2453303 | 39155.7 |
| abc transporter | ALO56_100245 | A2RKA7 | Positive | 2453300 - 2454814 | 54374.2 |
| branched-chain amino acid abc transporter permease | ALO56_00785 | Not Available | Positive | 2454807 - 2455922 | 40507.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









