Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphoryl diester phosphodiesterase | ALO56_00385 | P10908 | Negative | 2432054 - 2432827 | 28496.4 |
| glycerol-3-phosphate abc transporter, atp-binding protein | ALO56_00386 | Q8UBB7 | Negative | 2432828 - 2433946 | 40671.8 |
| glycerol-3-phosphate abc transporter permease | ALO56_00387 | Q8YCB0 | Negative | 2433943 - 2434836 | 32538.9 |
| glycerol-3-phosphate abc transporter permease | ALO56_00388 | A1JID8 | Negative | 2434833 - 2435726 | 32436.6 |
| glycerol-3-phosphate abc transporter substrate-binding protein | ALO56_00389 | Q926H8 | Negative | 2435723 - 2437033 | 48022.7 |
| rok family protein | ALO56_00390 | P16557 | Positive | 2437117 - 2438331 | 44705.7 |
| tonb-dependent receptor:tonb-dependent receptor | ALO56_04420 | Not Available | Negative | 2438344 - 2440710 | 85788.1 |
| methylase involved in ubiquinone/menaquinone biosynthesi | ALO56_00392 | Not Available | Negative | 2440840 - 2441697 | 31155.6 |
| 2-keto-3-deoxy-l-fuconate dehydrogenase | ALO56_00393 | Q8P3K4 | Positive | 2441989 - 2442723 | 25580.7 |
| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase | ALO56_00394 | A9ALD1 | Positive | 2442735 - 2443610 | 31474.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









