Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit alpha | ALO56_00375 | Q3K612 | Positive | 2421138 - 2422139 | 36647.9 |
| 50s ribosomal protein l17 | ALO56_00376 | Q4ZMR9 | Positive | 2422181 - 2422567 | 14511.7 |
| catalase | ALO56_00377 | Q27710 | Positive | 2422737 - 2424182 | 53693.8 |
| bacterioferritin | ALO56_00378 | P77930 | Positive | 2424338 - 2424802 | 18063.7 |
| uvrabc system protein a | ALO56_04418 | Q88QK7 | Negative | 2424933 - 2427833 | 107006.0 |
| major facilitator family transporter | ALO56_00380 | P77726 | Positive | 2427956 - 2429350 | 49075.5 |
| single-stranded dna-binding protein | ALO56_00381 | Q889U1 | Positive | 2429360 - 2429914 | 20531.8 |
| nadh:flavin oxidoreductase | ALO56_00382 | Q69TH4 | Positive | 2430122 - 2430421 | 10716.9 |
| nadh:flavin oxidoreductase | ALO56_00383 | P77258 | Positive | 2430418 - 2431254 | 29559.6 |
| inositol monophosphatase family protein | ALO56_00384 | P65166 | Negative | 2431302 - 2432057 | 26977.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









