Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_01870 | Not Available | Negative | 174612 - 175271 | 24051.7 |
| superoxide dismutase | ALO56_01871 | O68901 | Positive | 175518 - 176036 | 17588.1 |
| transporter membrane protein | ALO56_01872 | Not Available | Negative | 176174 - 177361 | 42994.2 |
| uncharacterized protein | ALO56_01873 | Not Available | Negative | 178394 - 179641 | 46830.4 |
| arac family transcriptional regulator | ALO56_04741 | Not Available | Positive | 179848 - 180696 | 32147.3 |
| sensor protein | ALO56_01875 | E0X9C7 | Negative | 181338 - 184703 | 122521.0 |
| bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2 | ALO56_01876 | Q9I0H4 | Positive | 185045 - 186229 | 43150.9 |
| lipase | ALO56_01877 | P71668 | Negative | 186233 - 187180 | 34887.5 |
| rna polymerase sigma factor | ALO56_01325 | Not Available | Positive | 189298 - 189816 | 19502.5 |
| regulatory protein | ALO56_01326 | Not Available | Positive | 189813 - 190796 | 35976.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









