Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l5 | ALO56_00363 | Q48D48 | Positive | 2414597 - 2415136 | 20458.2 |
| 30s ribosomal protein s14 | ALO56_00364 | Q48D49 | Positive | 2415150 - 2415455 | 11490.2 |
| 30s ribosomal protein s8 | ALO56_00365 | Q48D50 | Positive | 2415669 - 2416061 | 14060.2 |
| 50s ribosomal protein l6 | ALO56_00366 | Q889V6 | Positive | 2416074 - 2416607 | 19266.3 |
| 50s ribosomal protein l18 | ALO56_00367 | Q48D52 | Positive | 2416618 - 2416968 | 12604.3 |
| 30s ribosomal protein s5 | ALO56_00368 | Q889V4 | Positive | 2416972 - 2417472 | 17703.6 |
| protein translocase subunit secy | ALO56_00371 | Q9HWF5 | Positive | 2418090 - 2419424 | 47901.6 |
| 30s ribosomal protein s13 | ALO56_00372 | Q48D58 | Positive | 2419700 - 2420056 | 13342.5 |
| 30s ribosomal protein s11 | ALO56_00373 | Q48D59 | Positive | 2420087 - 2420476 | 13616.4 |
| 30s ribosomal protein s4 | ALO56_00374 | Q48D60 | Positive | 2420495 - 2421115 | 23077.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









