Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l23 | ALO56_100093 | Q4K535 | Positive | 2410478 - 2410795 | 11489.0 |
| 50s ribosomal protein l2 | ALO56_00354 | Q3K5Z1 | Positive | 2410810 - 2411634 | 29679.1 |
| 30s ribosomal protein s19 | ALO56_00355 | Q889W7 | Positive | 2411651 - 2411926 | 10307.8 |
| 50s ribosomal protein l22 | ALO56_00356 | Q48D41 | Positive | 2411940 - 2412272 | 11893.6 |
| 30s ribosomal protein s3 | ALO56_00357 | Q48D42 | Positive | 2412286 - 2412972 | 25754.5 |
| 50s ribosomal protein l16 | ALO56_00358 | Q48D43 | Positive | 2412985 - 2413398 | 15431.2 |
| 50s ribosomal protein l29 | ALO56_00359 | Q48D44 | Positive | 2413398 - 2413589 | 7172.78 |
| 30s ribosomal protein s17 | ALO56_00360 | Q48D45 | Positive | 2413592 - 2413858 | 10097.3 |
| 50s ribosomal protein l14 | ALO56_00361 | Q48D46 | Positive | 2413882 - 2414250 | 13410.7 |
| 50s ribosomal protein l24 | ALO56_00362 | Q48D47 | Positive | 2414262 - 2414576 | 11273.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









