Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO56_03685 | Not Available | Negative | 2377260 - 2377400 | 5285.98 |
| thij/pfpi family protein | ALO56_05104 | Q5AF03 | Negative | 2377520 - 2378326 | 28845.2 |
| uncharacterized protein | ALO56_05105 | Not Available | Negative | 2378363 - 2379646 | 47018.6 |
| transcriptional regulatory protein rtcr | ALO56_03688 | P38035 | Negative | 2379814 - 2381427 | 60591.2 |
| rna-splicing ligase rtcb | ALO56_03689 | P46850 | Positive | 2381640 - 2382902 | 46055.6 |
| uncharacterized protein | ALO56_03690 | P94389 | Positive | 2382950 - 2383756 | 30707.4 |
| uncharacterized protein | ALO56_05106 | Not Available | Negative | 2385146 - 2386078 | 34714.7 |
| c4-dicarboxylate transporter/malic acid transport protein | ALO56_03692 | A3R044 | Negative | 2387135 - 2388295 | 41544.8 |
| regulatory protein lysr | ALO56_03693 | P0ACR6 | Positive | 2388422 - 2389318 | 32610.5 |
| type iii pantothenate kinase | ALO56_00337 | Q4ZMM9 | Positive | 2390445 - 2391194 | 26781.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









