Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maleylacetoacetate isomerase | ALO56_03676 | P57109 | Positive | 2366034 - 2366678 | 23852.3 |
| 4-hydroxyphenylpyruvate dioxygenase | ALO56_03677 | P80064 | Positive | 2366774 - 2367898 | 42076.4 |
| iclr family transcriptional regulator | ALO56_03678 | Not Available | Negative | 2367939 - 2368727 | 27528.5 |
| homogentisate 1,2-dioxygenase | ALO56_03679 | Q87Z79 | Positive | 2368863 - 2370167 | 48402.4 |
| fumarylacetoacetase | ALO56_03680 | Q8RW90 | Positive | 2370167 - 2371453 | 46079.6 |
| n-acyl-d-amino acid deacylase family protein | ALO56_03681 | P72349 | Negative | 2371469 - 2372932 | 52928.9 |
| transcriptional regulator aefr | ALO56_03682 | Not Available | Negative | 2372963 - 2373571 | 22847.2 |
| uncharacterized protein | ALO56_03683 | P9WKP2 | Positive | 2373804 - 2374919 | 42382.3 |
| cyanate transport protein cynx | ALO56_101181 | P17583 | Positive | 2375663 - 2376256 | 20947.0 |
| helix-turn-helix, fis-type | ALO56_03684 | P04680 | Positive | 2376324 - 2377259 | 35131.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









