Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconate permease | ALO56_100454 | Q9ZIJ1 | Negative | 2353471 - 2354823 | 47511.4 |
| gluconokinase | ALO56_05101 | Q5FQ97 | Negative | 2354927 - 2355634 | 24993.8 |
| gluconate utilization system gnt-i transcriptional repressor | ALO56_03668 | Q9I1F6 | Positive | 2355698 - 2356714 | 36363.9 |
| uncharacterized protein | ALO56_03669 | Not Available | Positive | 2357009 - 2357989 | 34946.5 |
| malate synthase g | ALO56_05102 | Q87Z72 | Negative | 2358113 - 2360296 | 80395.2 |
| glcg protein | ALO56_03671 | P0AEQ2 | Negative | 2360453 - 2360860 | 13947.6 |
| glycolate oxidase iron-sulfur subunit | ALO56_03672 | P52074 | Negative | 2360893 - 2362119 | 44480.4 |
| glycolate oxidase fad binding subunit | ALO56_03673 | P52073 | Negative | 2362123 - 2363181 | 37984.6 |
| glycolate oxidase subunit glcd | ALO56_03674 | P0AEQ0 | Negative | 2363181 - 2364680 | 53960.3 |
| dna-binding transcriptional regulator glcc | ALO56_03675 | P0ACL6 | Positive | 2365147 - 2365914 | 28698.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









