Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative vanillate o-demethylase oxygenase subunit oxidoreductase protein | ALO56_100326 | Not Available | Positive | 2333068 - 2334150 | 41023.1 |
| dihydroxyacetone kinase subunit dhal | ALO56_03091 | Q92EU3 | Negative | 2334147 - 2334803 | 22781.2 |
| pts-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit dhak | ALO56_03092 | Q927E6 | Negative | 2334807 - 2335808 | 35191.5 |
| zinc-containing alcohol dehydrogenase superfamily protein | ALO56_04990 | A0QXD8 | Negative | 2335849 - 2336982 | 41717.7 |
| short chain dehydrogenase | ALO56_03094 | Q92EU6 | Negative | 2336992 - 2337753 | 26727.3 |
| periplasmic binding protein/laci transcriptional regulator | ALO56_03095 | A0QYB5 | Negative | 2338033 - 2339043 | 36046.1 |
| sugar abc transporter, cut2 family, permease protein | ALO56_04991 | Not Available | Negative | 2339096 - 2340148 | 36883.1 |
| sugar abc transporter, cut2 family, atp-binding protein | ALO56_03097 | Q4ZRC6 | Negative | 2340070 - 2341557 | 53731.1 |
| ribose/galactose isomerase | ALO56_03098 | Q92EU5 | Positive | 2341821 - 2342297 | 16768.1 |
| putative sugar-binding domain protein | ALO56_03099 | A4WER5 | Positive | 2342361 - 2343341 | 35430.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









