Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter substrate-binding protein | ALO56_04989 | P23847 | Positive | 2322297 - 2323907 | 58523.5 |
| uncharacterized protein | ALO56_03083 | Not Available | Positive | 2323973 - 2324503 | 18829.6 |
| alkylhydroperoxidase ahpd core | ALO56_03084 | Not Available | Positive | 2324500 - 2325099 | 21920.0 |
| fatty acid desaturase | ALO56_03085 | Not Available | Negative | 2325111 - 2326583 | 53967.8 |
| uncharacterized protein | ALO56_03086 | Not Available | Positive | 2326712 - 2327437 | 27823.3 |
| uncharacterized protein | ALO56_03087 | Not Available | Positive | 2327434 - 2328546 | 41614.9 |
| uncharacterized protein | ALO56_03088 | Not Available | Negative | 2328556 - 2329476 | 33994.9 |
| uncharacterized protein | ALO56_03089 | Not Available | Negative | 2329476 - 2330366 | 34828.3 |
| putative fatty acid desaturase | ALO56_100339 | Not Available | Positive | 2330454 - 2331479 | 39447.9 |
| auxin-responsive gh3-related protein | ALO56_03090 | Q53P49 | Positive | 2331479 - 2333071 | 57740.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









