Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | ALO56_03616 | P19906 | Positive | 160268 - 161353 | 39986.6 |
| nitrogen regulation protein nr | ALO56_03617 | P41789 | Positive | 161350 - 162786 | 53180.5 |
| aldo/keto reductase | ALO56_03618 | Q8X529 | Negative | 163034 - 164071 | 38168.3 |
| alkanesulfonate transporter substrate-binding subunit | ALO56_03619 | P75853 | Negative | 164098 - 165051 | 34425.4 |
| xenobiotic compound monooxygenase, dsza family, a subunit | ALO56_03620 | P54950 | Negative | 165082 - 166407 | 48044.7 |
| tonb-dependent receptor | ALO56_03621 | A1JTG3 | Negative | 166437 - 168752 | 84344.5 |
| laci family transcriptional regulator | ALO56_03622 | O07567 | Positive | 168923 - 169969 | 37646.2 |
| beta-aspartyl peptidase | ALO56_05091 | Q6FDF5 | Negative | 170056 - 172131 | 76246.9 |
| uncharacterized protein | ALO56_01868 | Not Available | Negative | 172625 - 173596 | 36374.1 |
| prephenate dehydratase | ALO56_01869 | Q01269 | Negative | 173695 - 174483 | 29172.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









