Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO56_200002 | Not Available | Negative | 2305374 - 2305628 | 9643.43 |
| transcriptional activator ftra | ALO56_04443 | Not Available | Negative | 2305668 - 2305770 | 3582.25 |
| dienelactone hydrolase family protein | ALO56_03074 | Q7DFU6 | Negative | 2305843 - 2306730 | 32396.3 |
| isopentenyl-diphosphate delta-isomerase | ALO56_03075 | Q989L5 | Positive | 2309178 - 2310227 | 36851.3 |
| lycopene cye | ALO56_03076 | Q01331 | Positive | 2311494 - 2312660 | 44370.3 |
| phytoene desaturase | ALO56_03077 | P22871 | Positive | 2312657 - 2314147 | 54641.2 |
| phytoene synthase | ALO56_03078 | P21683 | Positive | 2314144 - 2315097 | 35464.2 |
| regulatory protein lysr | ALO56_03079 | P0A4T4 | Positive | 2315768 - 2316718 | 34008.6 |
| uncharacterized protein | ALO56_03080 | Q8PDQ6 | Positive | 2316932 - 2318392 | 53088.1 |
| oligopeptide/dipeptide abc transporter atp-binding protein-like protein | ALO56_03081 | A5VU86 | Positive | 2321271 - 2322284 | 36928.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









