Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase | ALO56_04796 | Not Available | Negative | 2274287 - 2275033 | 26518.6 |
| mn2+/fe2+ transporter | ALO56_02024 | Not Available | Positive | 2275367 - 2276683 | 47952.5 |
| tonb-dependent siderophore receptor | ALO56_04798 | Q05098 | Negative | 2276752 - 2279154 | 86487.0 |
| biopolymer transport protein exbd/tolr | ALO56_02026 | Not Available | Negative | 2279435 - 2279836 | 14369.4 |
| mota/tolq/exbb proton channel | ALO56_02027 | Not Available | Negative | 2279838 - 2280560 | 25691.0 |
| uncharacterized protein | ALO56_02028 | Not Available | Negative | 2280644 - 2281480 | 29285.7 |
| uncharacterized protein | ALO56_02029 | Not Available | Negative | 2281791 - 2281973 | 6698.05 |
| transporter | ALO56_04799 | Not Available | Negative | 2282063 - 2282590 | 18574.5 |
| twin-arginine translocation pathway signal | ALO56_02031 | Q9ZCW7 | Negative | 2282551 - 2283156 | 22015.7 |
| uncharacterized protein | ALO56_02032 | Not Available | Negative | 2283280 - 2283669 | 13768.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









