Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO56_200001 | Not Available | Positive | 2252499 - 2253026 | 18898.9 |
| hypothetical protein | ALO56_200135 | Not Available | Positive | 2253182 - 2254261 | 40260.4 |
| dna topoisomerase | ALO56_02007 | Q9KQF5 | Positive | 2254506 - 2256482 | 72375.7 |
| endoribonuclease l-psp family protein | ALO56_02008 | P39332 | Positive | 2256546 - 2256944 | 14795.1 |
| 5'-nucleotidase sure | ALO56_02009 | Q390V3 | Negative | 2256954 - 2257775 | 29601.5 |
| uncharacterized protein | ALO56_02010 | Not Available | Negative | 2257835 - 2258146 | 11099.3 |
| uncharacterized protein | ALO56_02011 | O34593 | Positive | 2258328 - 2258720 | 14739.7 |
| methyl-accepting chemotaxis protein | ALO56_04791 | Not Available | Negative | 2258776 - 2260641 | 68131.3 |
| methyl-accepting chemotaxis protein | ALO56_02012 | Q88D09 | Negative | 2260750 - 2262363 | 57160.1 |
| trap-type c4-dicarboxylate transport system, periplasmic component | ALO56_02013 | P37676 | Negative | 2262546 - 2263565 | 37090.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









