Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus bioproteinsis protein pilc | ALO56_00306 | P22609 | Positive | 2220878 - 2222095 | 44037.6 |
| type 4 prepilin-like protein leader peptide-processing enzyme | ALO56_00307 | P22610 | Positive | 2222097 - 2222969 | 32019.0 |
| dna gyrase inhibitor yacg | ALO56_00308 | Q4ZYC0 | Positive | 2223586 - 2223795 | 7436.59 |
| uncharacterized protein | ALO56_00309 | Not Available | Negative | 2224141 - 2224602 | 17355.3 |
| uncharacterized protein | ALO56_00310 | Not Available | Positive | 2224727 - 2225356 | 24400.1 |
| uncharacterized protein | ALO56_00311 | Not Available | Positive | 2225353 - 2225898 | 20298.3 |
| 50s ribosomal protein l13 | ALO56_00312 | Not Available | Positive | 2225912 - 2226085 | 6768.45 |
| fad-dependent pyridine nucleotide-disulfide oxidoreductase | ALO56_00313 | P00393 | Positive | 2226149 - 2227447 | 46707.4 |
| amino acid adenylation | ALO56_00314 | P45745 | Positive | 2227818 - 2231852 | 146640.0 |
| fad dependent oxidoreductase | ALO56_00315 | Not Available | Positive | 2233355 - 2234722 | 50447.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









