Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00299 | Q6FAX7 | Negative | 2210713 - 2211807 | 39751.6 |
| uncharacterized protein | ALO56_00300 | Not Available | Negative | 2211800 - 2212558 | 28003.4 |
| uncharacterized protein | ALO56_00301 | Not Available | Negative | 2212551 - 2213684 | 40587.5 |
| serine protease | ALO56_00302 | Not Available | Negative | 2213762 - 2214904 | 40587.2 |
| uncharacterized protein | ALO56_00303 | Not Available | Negative | 2214959 - 2215969 | 37083.0 |
| uncharacterized protein | ALO56_00304 | P43999 | Positive | 2216077 - 2216628 | 21272.8 |
| uncharacterized protein | ALO56_00305 | Not Available | Positive | 2217351 - 2218331 | 36037.3 |
| Trna-thr | Not Available | Not Available | Positive | 2218415 - 2218491 | Not Available |
| type iv pilus bioproteinsis protein | ALO56_04404 | O30583 | Negative | 2218526 - 2219038 | 17285.0 |
| type iv pilus bioproteinsis protein pilb | ALO56_100060 | P22608 | Positive | 2218869 - 2220875 | 73515.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









